MatLab scripts to segment and analyse polymerase clusters in 3D microscopy image stacks: https://github.com/lhilbert/NuclearObjects_ImageAnalysis
Scripts for the interactive choice and fine-tuning of image segmentation algorithms, as shown in Hajiabadi et al. Journal of Systems and Software, 2024: https://doi.org/10.5281/zenodo.10687188
3D-printing model for a stamp to create imaging wells in agarose for the microscopy of zebrafish embryos https://doi.org/10.5281/zenodo.10797918
Molecular Dynamics Simulations of Enhancer-Promoter Interactions in a Model Shoe Box, repository with ongoing code development: https://github.com/lhilbert/EnhancerShoeBox
Video of a developing one-cell-stage to 21-somite-stage development of a zebrafish embryo: https://doi.org/10.5281/zenodo.12547356
Lecture Notes “Basics of Image Processing, using Cell Profiler”, view-only link for Overleaf: https://www.overleaf.com/read/gsnnthgrtwhf#73dfb7